Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRFMQIWKPAVIGFLLLTLVCGVLYPGVVTVFAGVAFHDKANGSIIEEKLADGTTGKVGSAEIGQ---TFTEPEYLIGRAASDGVATNLNPTS--EEQKQLVEKRIAWWH-------KLDPTNNRV-IPMDLVTASASGVDPDISEAAAAYQVDRISRERGISTK-EVKEIIAEHTSNRLLGFWGEPTVNVLQVNLALDRLKM |
| 4D9O Chain:A ((10-231)) | MVPPKKDMEKGVIFSDLCNFLITQTLQGWKVYWAGIEFDVSQKGMALLTRLKTAMTRNLFPHLFQNPNSVIQSPIWALRVILAAGLQDQLLDHSLVEPLTGALGLISDWLLTTTSTHFNLRTRSVKDQLSLRMLSLIRSNILQFINKLDALHVVNYNGLLSSIEIGTSTHTIIITRTNMGFLVEVQEVKFSLLHESAFKPFT-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D9O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -40641 for 1383 contacts (-29.4/contact) +
2D Compatibility (PS) -20038 + (NN) 374 + (LL) 272
1D Compatibility (HY) -9200 + (ID) 1450
Total energy: -70683.0 ( -51.11 by residue)
QMean score : 0.255
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