Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPNIKEIAKLAGVSVTTVSRVLNNHPY-VAEEKRVRVQAVIDELDYSPNRSAMDLARGKTNTVGVIIPYNDHPWFDKIVNGILEVAFKNRYSVTLFPTGYDPKEEEKYLMRLKTKQVDGLIITSRANNWDVILPYLAYGPIIACEYVESKEVSCSYIDRVKAYRAGFQFLEDEGYKKVAFTAGRASRESTSTYGKINAYEQVFGPVGDNRFLSECYTLEDGLKAGEHFFAAGKDWPDAIYANGDEVAAGVMYHVKKLGLRVPEDVAILGQENLPIGKVLEITTLDHNLKKLGENAFTIFEQGKLQRIKVEHELIRRKTV |
1QPZ Chain:A ((1-57)) | -ATIKDVAKRANVSTTTVSHVINKTR-FVAEETRNAVWAAIKELHYS--PSAVARSLKVNH------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QPZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -23615 for 345 contacts (-68.4/contact) +
2D Compatibility (PS) -6296 + (NN) -4736 + (LL) 17472
1D Compatibility (HY) -2800 + (ID) 1350
Total energy: -21325.0 ( -61.81 by residue)
QMean score : 0.665
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