Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLENDIKKVLYSEEDIILKTKELGAKLTADY--AGKNPLLVGVLKGSVPFMAELLKHIDTHVEIDFMVVSSYHGGTTSSGEVKILKDVDTNIEGRDVIFIEDIIDTGRTLKYLRDMFKYRQANSVKVATLFDKPEGRLVDIDADYVCYDIPNEFIVGFGLDYAENYRNLPYVGVLKEEIYSK
1G9S Chain:B ((10-175))
-------EVMIPEAEIKARIAELGRQITERYKDSGSDMVLVGLLRGSFMFMADLCREVQVSHEVDFMTASS--------RDLKILKDLDEDIRGKDVLIVEDIIDSGNTLSKVREILSLREPKSLAICTLLDKPSRREVNVPVEFIGFSIPDEFVVGYGIDYAQRYRHLPYIGKVILLD---
General information:
TITO was launched using:
RESULT:
Template:
1G9S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114851 for 1220 contacts (-94.1/contact) +
2D Compatibility (PS) -16941 + (NN) -4380 + (LL) 872
1D Compatibility (HY) -19600 + (ID) 3450
Total energy: -158350.0 ( -129.80 by residue)
QMean score : 0.534
(partial model without unconserved sides chains):
PDB file :
Tito_1G9S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G9S-query.scw
PDB file :
Tito_Scwrl_1G9S.pdb
: