Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKWLVKASSLVVLGGMVLSAGSRVLADTYVRPIDNG---RITTGFNG------------------YPGHCGVDYAVPTGTI--IRAVADGTVKFAGAGANFSWMTDLAGNCVMIQHADGMHSGYAHMSRVVARTGEKVKQGDIIGYVGATGMA--TGPHLHFEFLPANPNFQNGFHGRINPTSLIANVATFSGKTQASAPSIKPLQSAPVQNQSSKLKVYRVDELQKVNGVWLVKNNTLTPTGFDWNDNGIPASEIDEVDANGNLTADQVLQKGGYFIFNPKTLKTVEKPIQGTAGLTWAKTRFANGSSVWLRVDNSQELLYK |
| 3TUF Chain:B ((75-223)) | -------------------------SMENVAMPVVDSENVSVVKKFYETDAAKEEKEAALVTYNNTYSLSKGIDLAEKDGKDFDVSASLSGTVVKAE------K-DPVLGYVVEVEHADGLSTVYQSLSEVSVEQGDKVKQNQVIGKSGKNLYSEDSGNHVHFEIR------KDGV--AMNPLNFMDKPVSSIEKAAT------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TUF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80036 for 944 contacts (-84.8/contact) +
2D Compatibility (PS) -13169 + (NN) -1407 + (LL) 8644
1D Compatibility (HY) -5600 + (ID) 1850
Total energy: -93418.0 ( -98.96 by residue)
QMean score : 0.401
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