Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSIKKSVIGFCLGAAALSMFACVDSSQSVMAAEKDKVEITWWAFPTFTQEKAKDGVGTYEKKVIKAFEKKNPNIKVKLETIDFTSGPEKITTAIEAGTAPDVLFDAPGRIIQYGKNGKLADLNDLFTDQFIKDVNNKNIIQASKSGDKAYMYPISSAPFYMAFNKKMLKDAGVLKLVKEGWTTSDFEKVLKALKNKGYTPGSFFANGQGGDQGPRAFFANLYSAPITDKEVT-----KYTTDTKNSVKSMKKIVEWIKKGYLMNGSQYDGSADIQNFANGQTAFTILWAPAQPKTQAKLLESSKVDYLEVPFPSEDGK-PDLEYLVNGFAVFNNKDENKVKASKKFIT-FIADDKKWGPKDVIRTG-AFPVRTSFGDLYKGDKRM-MKISKWTQYYSPYYNTIDGFSEMRTLWFPMVQSVSNGDEKPADALKDFTQKANDTIKKAAK |
| 1HSJ Chain:A ((3-376)) | ----------------------------------EEGKLVIWINGD--KG------YNGLAEVGKKFEKD-TGIKVTVEH--PDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKA--FQDKLYPFTWDAV-RYNGKLIAYPIAVEALSLIYNKDLLPN------PPK--TWEEIPALDKELKAKGKSALM-FNLQ--EPYFTWPLI-AADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADT--DYSIAEAAFNKGETAMTINGPWAWSNIDT-----SKVNYGVTVLPTFKGQPSKPFVGVLSAGINA--ASPNKELAKEFLENYLLTDEGL-EAVNKDKPLGAVALKSYEEELAKDPRIAATMEN-AQ-KGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDEALAAAQTNAAAEFMSKIN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HSJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -27312 for 3241 contacts (-8.4/contact) +
2D Compatibility (PS) -38988 + (NN) -18458 + (LL) 5044
1D Compatibility (HY) -8800 + (ID) 3600
Total energy: -92114.0 ( -28.42 by residue)
QMean score : 0.430
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