Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKHFGSKVRNLRVTRNITREDFCGDETELSVRQLARIESGQSIPNLTKAHYIAKQLN-VKLDILTGGESLELPKRYKELKYKLLRTPTYGDANR-LAVREAYFDEIYEVFYEELPEDERLIIDCMQSKLDVHFSVNDNFGITILHDYFDQIKKK-KEYTTNDFVMIDLYLLCFSINYGMKSLYSLENYHFIM-SKLLEQDNLLPEDNFQLNNVLLNHVELAFQFKQKKYVQQIIHRSNAIMTEIHDFQKRPILSLIEWKYLLII-EK-DRTKAETCFKQSILFAELIGDLYLKGKLIEEWNKDLT----- |
| 4RYK Chain:A ((4-303)) | HHHSYGELIREIRLSKGLTQKEVYTGI--ISRSYAIGFEKGKHEITLSLFEEILKRI-MVPLDEFFFIYRDFSSTEDDSFWIDFVELSGKNDVVGMQALLDKITLE-----RTEQSEVRKAILHTRIQTINHYLRTNVSNISDEYKKIIHDYLWKMQTWTLEEVRIFSNGISFFE--------EEVQIHFYQIMLKSYEKYRYYDRGRLLFCHLFANLTDELIIQNKINYANLVLEKLKEASETSGSFNSAFYRIVANYYQGAIWMKEGEVEKGYRQAKRAIQTWKELHYEAIADLYSVVLKQFLEKENIQ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4RYK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -66239 for 1985 contacts (-33.4/contact) +
2D Compatibility (PS) -30195 + (NN) -12484 + (LL) 1264
1D Compatibility (HY) -4000 + (ID) 1650
Total energy: -113304.0 ( -57.08 by residue)
QMean score : 0.320
|
|
|