Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKEAILNFLQA-KGEPTWLQ-ELRLKAFEKIEEL-ELPVIERV---------------------KFHRWNLGDGTILENDYTANIPDFTELGNNPKLVQIGTQTVLEQVPMELIEKGVVFTDFYSALEEIPEVIERYFGKARPFEEDRLAAYHTAYFNSGAVLYIPDNVEITQPIEGLFYQDNQSKVPFNKHILLIVGK----NAKVSYLER---FESIGDGTERTSANISVEVIAQAGSQIKFASIDRLGENVTTFISRRGRHSSDATIDWALGVMNEGNVVADFDSDL-IGDGSHANLKVVAASSGRQVQGID-----TRVTNYGCN---SVGHILQHGVILERGTLTFNGIGHIIKGAKGADAQQESRVLMLSDKARSDANPILLIDENDVTAGHAASIGQVDPEDLYYLMSRGLNQKTAEQLVIRGFLGTVIAEIP---------VKEVRD--------------EMIAVIDTKLEKR-- |
| 5A1F Chain:A ((1-458)) | ---SMFLPPPECPVFEPSWEEFADPFAFIHKIRPIAEQTGICKVRPPPDWQPPFACDVDKLHFTPRIQRLNELEAQTRVRDYT--LRTFGEMADAFKSDYFNM-------PVHMVPTELVEKEFWRLVSTIEEDVTVEYGADIASKE----------FGSG--FPVRDSPEEEEYLDSGW---NLNNMPVMEQSVLAHITADICGMKLPWLYVGMCFSSFCWHIEDHWS-YSINYLHWGEPKTWYGVPGYAAEQLENVMKKLAPELFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLD----VVVASTVQKDMA--IMIEDEKALRETVRKLGVIDSERMDFELLP-DDERQCVKCKTTCFMSAISCSCKPGLLVCLHHVKELCSCPPYKYKLRYRYTLDDLYPMMNALKLRAE |
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General information:
TITO was launched using:
| RESULT:
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Template: 5A1F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -20012 for 2869 contacts (-7.0/contact) +
2D Compatibility (PS) -38749 + (NN) 6158 + (LL) 2828
1D Compatibility (HY) -17200 + (ID) 3150
Total energy: -70125.0 ( -24.44 by residue)
QMean score : 0.173
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