Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIFEKAPAKLNLGLDIKGRCDDGYHELAMIMVSIDLNDYVTISELKEDCIVIDSDSSKMPLNNDNDVFKAADIIKNQYGINKGVHIRLEKSIPVCAGLGGGSTDAAATIRALNRLWNLQMDYDEMVAIGFKIGSDVPYCLGGGCSLVLGKGEIVKPLPTLRPCWIVLVKPDFGISTKSIFRDIDCKSISRVDIDLLKSAILSSDYQLMVKSMGNSLEDITITKNPVISTIKERMLNSGADVALMTGSGPTVFSMCSTEKKADRVFNSMKGFCKEVYKVRLLR |
| 1UEK Chain:A ((1-268)) | --MERLAPAKVNLGLSVRFRREDGYHELHTLFAPFSLADRLVVEPVSSGLHFQG------PYGRENLAYRAASLYLEAAGQPGGVRILLEKRIPEGAGLGGGSSDAAQVLLALQALYPAEVD---LFALARTLGADVPFFLLGRGAEARGVGERLKPLA-LPPVPAVVFFPGLRVPTPLVYRAVRPEDFGP---DLPVEAILEALARGEEPPYWNSLEGPAFRLFPELKEVRGRMRALGLRGVLMSGSGSAFFGLAEGPDHARRAAEALRAWGRAWAGTLGGG |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1UEK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -159903 for 2348 contacts (-68.1/contact) +
2D Compatibility (PS) -28986 + (NN) -4729 + (LL) 912
1D Compatibility (HY) -11600 + (ID) 4200
Total energy: -208506.0 ( -88.80 by residue)
QMean score : 0.400
|
|
|