Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MILLESYEEIAAYIDSTKKVVFFFTADWCPDCQFIYPVMPSIEKDF-SDFVFVRVNRDDYIELAQQWNIFGIPSFVVVENGQELGRLVNKNRKT--KAEITKFLAEINHK
2YJ7 Chain:A ((16-106))
-------------LKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDENPNTAAQYGIRSIPTLLLFKNGQVVDRLVGAQPKEALKERIDKHL------
General information:
TITO was launched using:
RESULT:
Template:
2YJ7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60710 for 570 contacts (-106.5/contact) +
2D Compatibility (PS) -9790 + (NN) -3849 + (LL) 2204
1D Compatibility (HY) -8800 + (ID) 1550
Total energy: -82495.0 ( -144.73 by residue)
QMean score : 0.620
(partial model without unconserved sides chains):
PDB file :
Tito_2YJ7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2YJ7-query.scw
PDB file :
Tito_Scwrl_2YJ7.pdb
: