Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYDTLIIGSGPGGMTAALYAARSNLKV----GLIEQG-APGGQMNNTAEIENYPGYDH-ISGPELSMKMYEPLEKFEVEHIYGIVQRVENDGDVKRVITED-ESYEAKTVILATGAKNSLLGVPGEEEYTSRGVSYCAVCDGA--FFRDQDLLVVGGGDSAVEEAVFLTQFAKSVTIIHRRDQLRAQKVLQDRAFANEKIKFVWDSVVKEIKGNEIKVSGVTVENLKTGEISEMTFGGVFIYVGLKPHSSMVSELGITDETGWVLTDTNMKTSIPGLYAIGDVRQKDLRQIATAVGEGAIAGQGVYNYITEHF |
4CBQ Chain:B ((4-314)) | IHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGTTIITETIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAKRMHVPGEDKYWQNGVSACAICDGAVPIFRNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRASKTMQERVLNHPKIEVIWNSELVELEGDGDLLNGAKIHNLVSGEYKVVPVAGLFYAIGHSPNSKFLGGQVKTADDGYILTE-GPKTSVDGVFACGDVCDRVYRQAIVAAGSGCMAALSCEKWLQTH- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CBQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -153522 for 2577 contacts (-59.6/contact) +
2D Compatibility (PS) -31900 + (NN) -2798 + (LL) 184
1D Compatibility (HY) -22800 + (ID) 6050
Total energy: -216886.0 ( -84.16 by residue)
QMean score : 0.493
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