Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----MFYTQNEEELIALGQKLGTVLKS-----GDIVLLTGNLGAGKTTLTKGIAKGLDIKQMIKSPTYTIVREYE-GRVPLYHLDVYRIGDDPDSID--LDDFLFGQGVTVIEWGELLSDNLINNYLEIVITRSNQGRQVQLEAYGHRAREIIEAIQDV
1HTW Chain:A ((1-158))
MESLTQYIPDEFSMLRFGKKFAEILLKLHTEKAIMVYLNGDLGAGKTTLTRGMLQGIGHQGNVKSPTYTLVEEYNIAGKMIYHFDLYRLADPEELEFMGIRDYFNTDSICLIEWSEKGQGILPEADILVNIDYYDDARNIELIAQTNLGKNIISAFSN-
General information:
TITO was launched using:
RESULT:
Template:
1HTW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87108 for 1115 contacts (-78.1/contact) +
2D Compatibility (PS) -15895 + (NN) -6890 + (LL) 192
1D Compatibility (HY) -11600 + (ID) 2350
Total energy: -123651.0 ( -110.90 by residue)
QMean score : 0.497
(partial model without unconserved sides chains):
PDB file :
Tito_1HTW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HTW-query.scw
PDB file :
Tito_Scwrl_1HTW.pdb
: