Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFHTKSLIQMAMMATLLVVLG---FIPAL-------PLGFIPVPIVLQNLGVMMAGVILGGRKGSLSILLFFL--VGLVIPVFSGLRSTIPVLTGPTAGYVIAWLFVPLLISYGVKLVNKKNFIAIFLIVWLAGVLFVDVAGAVWLASYTNIPLDKSLLQNLVFIPGDTIKAIIAAVVAVKYKDSFFLTEK
1Q59 Chain:A ((1-172))
MAYSTREILLALCIRDSRVHGNGTLHPVLELAARETPLRLSPEDTVVLRYHVLLEEIIERNSETFTETWNRFITHTEHVDLDFNSVFLEIFHRGDPSLGRALAWMAWCMHACRTLCCNQSTPYYVVDLSV--RGMLEASEGLDGWIHQQGGWS---TLIEDNIPGDDDDLE---------HHHHHH-----
General information:
TITO was launched using:
RESULT:
Template:
1Q59.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -163898 for 1137 contacts (-144.1/contact) +
2D Compatibility (PS) -16520 + (NN) -7490 + (LL) 2584
1D Compatibility (HY) -2400 + (ID) 1400
Total energy: -189124.0 ( -166.34 by residue)
QMean score : 0.240
(partial model without unconserved sides chains):
PDB file :
Tito_1Q59.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q59-query.scw
PDB file :
Tito_Scwrl_1Q59.pdb
: