Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKYHLPKAYDKLEDMLADESIDVIYVATINQDHYKVAKAALLAGKHVLVEKPFTLTYDQANELFALAESCNLFLMEAQKSVFIPMTQVIKKLLASGEIGEVISISSTTAYPNIDHVTWFRELELGGGTVHFMAPYALSYLQYLFDATITHASGTAT-FP-----KGQSDSQSKLLLQLSNGVLVDIFLTTRLN--LPHEMIIYGTEGRLIIPHFWKTTHAKLVRNDTS--AR--TI----QVDMVSDFEKEAYHVSQMILEGQRVSHIMTPQLTLSGVKIIEDLYRSWGK |
| 3EUW Chain:A ((3-326)) | -LTLRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGA-EAVASPDEVFARDDIDGIVIGSPTSTHVDLITRAVERGIPALCEKPIDLDIEMVRACKEKIGDGASKVMLGFNRRFDPSFAAINARVANQEIGNLEQLVIISRDPAPAPKDYI---AGSGGIFRDMTIHDLDMARFFVPN-IVEVTATGANVFSQEIAEFNDYDQVIVTLRGSKGELINIVNSRHCSYGYDQRLEAFGSKGMLAADNIRPT--T-VRKHNAESTEQADPIFNFFLERYDAAYKAELATFAQGIRDGQ--GFSPNFEDGVIALELANACLESAQT |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EUW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -197284 for 2533 contacts (-77.9/contact) +
2D Compatibility (PS) -32485 + (NN) -5329 + (LL) 952
1D Compatibility (HY) -8400 + (ID) 2600
Total energy: -245146.0 ( -96.78 by residue)
QMean score : 0.472
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