Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQTKKEFILGLTIIITLTLLIMLIFLVMFNKSSNSKLKQTKDRRVLSTSTTRTSSSSHDQKIVEKSLEKKKMVMEQDMELMNAYRLYYDYAHLSLKEVVLAYMSEYGIEKNSVAFSYKNLKTGQRDAMNDTQAMTAGSTYKLPLNMLVVDAVVKGKLSMEERFDITETDYE-YIGEHNNYVAAFSGAMSIDDMQKYSLVYSENTPAYALAERIGGMDSAYSKFGRYGQSKGDIKNI---------QKNGNKVTTDYYIQVLDYLWKHR----KKYDSLITYLEEAFP-TDYYRALIPSDVVVAQKPGYV-REALNVGAIVK-E-EVPYIVAIYTAGLGGSTQEDSEINGVGLYQLEQLCFVINQWHRVNMN |
| 1W7F Chain:A ((48-303)) | -------------------------------------------------------------------------------------------------DDFAKLEEQF---DAKLGIFALDTGTNRTVTYRPDERFAFASTIKALTVGVLLQQK--SIEDLNQRITYTRDDLVNYNPITE-K-H-VDTGMTLKELADASLRYSDNTAQNLILKQIGGPESLKKELRKIGDEVTNPERFEPELNEVNPGETQDTSTARALATSLQAFALEDKLPSEKRELLIDWMKRNTTGDALIRAGVPEGWEVADKTGAGSYGTRNDIAIIWPPKGDPVVLAVLSSRDKKDAKYDDKL----IAEATKVVVKALN------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W7F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44009 for 2311 contacts (-19.0/contact) +
2D Compatibility (PS) -25097 + (NN) -600 + (LL) 9888
1D Compatibility (HY) -5200 + (ID) 1900
Total energy: -66918.0 ( -28.96 by residue)
QMean score : 0.383
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