Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATITVFSKNNCMQCKMTKKFLDQHGADFEEINIDEKPEK---IEYVKN-----LGFSAAPVIEAGNVVFSGFQPSKLKELV
3MSZ Chain:A ((4-77))
-MKVKIYTRNGCPYCVWAKQWFEENNIAFDETIIDDYAQRSKFYDEMNQSGKVIFPISTVPQIFIDDEHIGGFTELKANADK
General information:
TITO was launched using:
RESULT:
Template:
3MSZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26119 for 403 contacts (-64.8/contact) +
2D Compatibility (PS) -7370 + (NN) -4177 + (LL) 208
1D Compatibility (HY) -4400 + (ID) 650
Total energy: -42508.0 ( -105.48 by residue)
QMean score : 0.640
(partial model without unconserved sides chains):
PDB file :
Tito_3MSZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MSZ-query.scw
PDB file :
Tito_Scwrl_3MSZ.pdb
: