Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYLKSLSIKNYRKYGEEVQTINFAHSKWSEMSGAEDESEKINRTEEYISKSSSLIVGKNNSGKSTIVKLLNTLQNTKSGSRNIFKYTDFNLKMLSDWYRFNIDNKSKEDIESIDKSDFPKLEFQLILGIDDENDLISSFEDILILGGIETVGTHENQEVAEVTIDVKYEVADVQSFLEELVKIKSSPREKIEQYDQGYQKELRYRKFLSLFSSNYFVLNFYPIRRDEPAKEFSLSSLLKVATIEANTVKNDKTLSQAYNKIVSTYIKNNDIVEIDSLVGDINYQVKDMVDTNIKDILQSAVSSIESTKNLKMNLHPDVTLEKIFANSIIY-EYQEGNNNIPESQ-FGMGYTNLMVIIAKIVDYIELYSEKDINGSVNILCIEEPESFMHPQMQE-LFIKNISKAIATLLG-KKQQLDTFQIIIT-THSTHILNSKIQSGNTLNNISYLGQVGVNNIIKNVSDDKIASGRDIDKKAYEYIKKYLRLEITDIFFADAVVLVEGVSEETYLRYEIDRHSILKNHHVKVYRIDGAYAHQFISLLDLLGVRTVIFTDLDLK-RSESEKKVDIKDNAEPDVIPSNIPDLEEKYGGVASSLTTNGTIQYFVKKLLNDDKAKYDKINSKIIEILTDKEELVVEYNNISMYSQGKINKYYATSFEEAIVLTNAGNEDENKYKKSLIKALQYVHPNMRYFGDIDETSEIADKSYMYQVKLSDGKSKFSTGI-VYLSITDKEFS-LKRPQYVES-G-LNLLCGYFEE----- |
| 2QR4 Chain:A ((25-602)) | --------LSDQEFDEKYLELSEELKQSEKHKG------------------------TLDQGASQFLNAIEFVLRVYRQTEVIYVYAHLKNDQ---------DTGNTDYQALYARASSLFSKVSEAVSW-----FEPEILQL-------------SDDQIWQYFKEEPKLEVYRHYIQQIVDNRAHVLSAEQESLLAGAGEIFDASSDTFAVLNNADLVF-PTIEGENGEIVQLSHGVYGQLLES---TDRRVREAAFKGLYSVYEQFRNTFA-STLGTHIKGHNFKAKVRNYSSAREASLSNNHIPESVYDTLVDVVNKH--LPLLHRYMELRKRLLEVEKLHMY------------------------DLYTPVLGEAPIEAKEKALEALKPMG-----------EEYMAITLDQLFTLVHEMGHSVHSYFTI----------------------------------------------------------FLAEIASTTNENILTEYLLETE---KDPRVRAYVLNHYLDGFKGTV-----FRQTQFAEFEHFMHTEDEKGVPL----TSEYLSDSYGKLNAKYYG----------------------------------PAVEEDPEIKFEWSRIPHFYYNYYVFQYSTGFSAASALAKKILNQEPEALENYLAYLKA------------------------------GNSDYPVEVMKKAGV-----DMTQAAYIEDAMSMFEQRLNELEELIDRE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QR4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 82903 for 3781 contacts (21.9/contact) +
2D Compatibility (PS) -50312 + (NN) 6336 + (LL) 16448
1D Compatibility (HY) 14000 + (ID) 2000
Total energy: 67375.0 ( 17.82 by residue)
QMean score : 0.115
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