Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEKDLLQLVVKAADEKRAEDIVILDLQPVTSVADYFVIMSASNSRQLEAIADNIREQVKGNGGDASHLEGDSKAGWVLLD-LNSVVVHIFSEDERQHYNLEKLWHEAPLLDAEDFMTE--
1W9G Chain:A ((1-102))
MSH-------------------TILLVQPTKRPEGRTYADYESVNECMEGVCKMYEEHLKRMNPNSPSITYDISQLFDFIDDLADLSCLVYRADTQTYQPYNKDWIKEKIYVLLRRQAQQA
General information:
TITO was launched using:
RESULT:
Template:
1W9G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22149 for 615 contacts (-36.0/contact) +
2D Compatibility (PS) -11087 + (NN) -5883 + (LL) 1940
1D Compatibility (HY) -3600 + (ID) 750
Total energy: -41529.0 ( -67.53 by residue)
QMean score : 0.334
(partial model without unconserved sides chains):
PDB file :
Tito_1W9G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W9G-query.scw
PDB file :
Tito_Scwrl_1W9G.pdb
: