Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKADKALLIVDMINNFEFDMGETL-----AKKTEKIVPHILSLKEHARQNEWPIIYINDHYGLWQADIK----------NIQQEC-TNERSKDIITKIAPVDADYFLI-KPKHSAFYETALHTLLTELQVRHIIITGIAGNICVLFTANDAYMREYSITIPKDCIASNSDEDNEFALTMMENVLFAEITTEEQIIEK
3KL2 Chain:A ((21-216))
LDPARTAIVLIEYQNEFTSDGGVLHGAVADVMQHTGMLANTVAVVDAARQAGVPIMHAPITFAEGYGELTRHPYGILKGVVDGKAFVKGTWGAAIVDELAPVNGDIVIEGKRGLDTFASTNLDFILRSKGVDTIVLGGFLTNCCVESTMRTGYERGFRVITLTDCVAATSQEEHNNAISYDFP-MFSVPMTSADVIA-
General information:
TITO was launched using:
RESULT:
Template:
3KL2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113810 for 1452 contacts (-78.4/contact) +
2D Compatibility (PS) -18495 + (NN) -4000 + (LL) 256
1D Compatibility (HY) -10800 + (ID) 1950
Total energy: -148799.0 ( -102.48 by residue)
QMean score : 0.358
(partial model without unconserved sides chains):
PDB file :
Tito_3KL2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KL2-query.scw
PDB file :
Tito_Scwrl_3KL2.pdb
: