Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIKEIIVVEGRDDTARIKLAVDADTIETNGSAIDDHVIDQIRLAQKTRGVIILTDPDFPGEKIRKTISEAVPGCKHAFLPKHLAKPKNKRGIGVEHASVESIRACLENVHEEMEAQPSDISA--EDLIHAGLIGGPAAKCRRERLGDLLKIGYTNGKQLQKRLQMFQIKKSDFMSALDTVMREEQNE
1F45 Chain:B ((20-197))
-----------------------------------QNLLRAVSNMLQKARQTLEFYP-----------CSTVEAC----LPLELTKNESCTSF-ITNGSSFMMALCLSSIYEDLKMYQVEFKTMNAKLLMDPKRQIFLDQNMLAVIDELMQALYKTKIKLCILLHAFRIRAVTIDRVMSYLNAS----
General information:
TITO was launched using:
RESULT:
Template:
1F45.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13054 for 864 contacts (-15.1/contact) +
2D Compatibility (PS) -14170 + (NN) -5882 + (LL) 3784
1D Compatibility (HY) -6800 + (ID) 850
Total energy: -36972.0 ( -42.79 by residue)
QMean score : 0.358
(partial model without unconserved sides chains):
PDB file :
Tito_1F45.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1F45-query.scw
PDB file :
Tito_Scwrl_1F45.pdb
: