Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKATGIVRRIDDLGRVVIPKEIRRTLRIREGDPLEIFVDRDGEVILKKYSPISELGDFAKEYADALYDSLGHSVLICDRDVYIAVSGSSKKDYLNKSISEMLERTMDQRSSVLESDAKSVQLVNGIDEDMNSYTVGPIVANGDPIGAVVIFSKD-QTMGEVEHKAVETAAGFLARQMEQ
3MMH Chain:A ((112-161))
--------------------------------------------------------------------------------------------------------------------------------LSRSEIVVPLFSDGRCIGVLDADSEHLAQFDETDALYLGELAKILEKRFE-
General information:
TITO was launched using:
RESULT:
Template:
3MMH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16661 for 259 contacts (-64.3/contact) +
2D Compatibility (PS) -5668 + (NN) -5601 + (LL) 8832
1D Compatibility (HY) -1600 + (ID) 550
Total energy: -21248.0 ( -82.04 by residue)
QMean score : 0.707
(partial model without unconserved sides chains):
PDB file :
Tito_3MMH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MMH-query.scw
PDB file :
Tito_Scwrl_3MMH.pdb
: