Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNFSRERTITEIQNDYKEQVERQNQLKKRRRKGLYRRLTVFGALVFLTAIVLASSVWSQTSSLSAKEEKKEQLEKELKSLKTKQTDLKEEISKLKDEDYVTELARRDLFMSGDGEIIFNVEKKSK
1NLW Chain:A ((48-79))
-------------------------------------------------------------HIKKLEDSDRKAVHQIDQLQREQRHLKRQLEK--------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1NLW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 9722 for 119 contacts (81.7/contact) +
2D Compatibility (PS) -3762 + (NN) -3456 + (LL) 7704
1D Compatibility (HY) -1600 + (ID) 300
Total energy: 8308.0 ( 69.82 by residue)
QMean score : 0.890
(partial model without unconserved sides chains):
PDB file :
Tito_1NLW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1NLW-query.scw
PDB file :
Tito_Scwrl_1NLW.pdb
: