Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVRVANSITELIGNTPIVKLNRLADENSADVYLKLEYMNPGSSVKDRIGLAMIEAAEKEGKLKAGNTII-EPTSGNTGIGLAMVAAAKGLKAILVMPDTMSMERRNLLRAYGAELVLTPGAEGMKGAIKKAEELAEKH-GYFVPQQFNNPSNPEIHRQTTGKEIVEQFGDDQLDAFVAGIGTGGTITGAGEVLKEAYPSIKIYAVEPSDSPVLSGGKPGPHKIQGIGAGFVPDILNTEVYDEIFPVKNEEAFEYARRAAREEGILGGISSGAAIYAALQVAKK-LGKGKKVLAIIPSNGERYLSTPLYQFD |
4AIR Chain:B ((32-335)) | ---VAQSIDQLIGQTPALYLNKL-NNTKAKVVLKMECENPMASVKDRLGFAIYDKAEKEGKLIPGKSVVVESSSGNTGVSLAHLGAIRGYKVIITMPESMSLERRCLLRIFGAEVILTPAALGMKGAVTMAKKIVTANPNAVLADQFATKYNALIHEETTGPEIWEQ-TNHNVDCFIAGVGTGGTLTGVARALKKMGSHARIVAVEPME--------------------------DRSLIDEVFCVAGDDAIETALKLTRSDGVFCGFSGGANVYAALKIAERPEMEGKTIVTIIPSFGERYLSTALYR-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AIR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85620 for 2401 contacts (-35.7/contact) +
2D Compatibility (PS) -31050 + (NN) -13720 + (LL) 1024
1D Compatibility (HY) -25600 + (ID) 6600
Total energy: -161566.0 ( -67.29 by residue)
QMean score : 0.519
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