Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFRIGQGFDVHQLVEGRPLIIGGIEIPYEKGLLGHSDADVLLHTVADACLGAVGEGDIGKHFPDTDPEFKDADSFKLLQHVWGIVKQKGYVLGNIDCTIIAQKPKMLPYIEDMRKRIAEGLEADVSQVNVKATTTEKLGFTGRAEGIAAQATVLIQKG
3F0G Chain:E ((24-179))
-FRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRH-----------DSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVVR-
General information:
TITO was launched using:
RESULT:
Template:
3F0G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114501 for 1236 contacts (-92.6/contact) +
2D Compatibility (PS) -15489 + (NN) -6777 + (LL) 156
1D Compatibility (HY) -13600 + (ID) 4400
Total energy: -154611.0 ( -125.09 by residue)
QMean score : 0.581
(partial model without unconserved sides chains):
PDB file :
Tito_3F0G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F0G-query.scw
PDB file :
Tito_Scwrl_3F0G.pdb
: