Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRKKLKWLSFLLGFIILLFLFKYQFSNNDSWKPWSLPLSGKIIYLDPGHGGPDGGAVG--GKLLEKDVTLEVAFRVRDYLQEQ-GALVIMTRESDTDLAPEGTKGYSRRKAEDLRQRVKLINHSEAELYISIHLNAIPSQKWSGAQSFYYGKYAENEKVAKYIQDELRRNLENTTRKAKRIHGIYLMQNVTKPGALIEVGFLSNPSEATLLGKPKYQDKVASSIYKGILRYFTEKGDPPE
1JWQ Chain:A ((1-179))---------------------------------------MKVVVIDAGHGAKDSGAVGISRKNYEKTFNLAMALKVESILKQNPKLEVVLTRSDDTFL--------------ELKQRVKVAENLKANVFVSIHANSSGSSASNGTETYYQR--SASKAFANVMHKYFAPATGLTDRG-IRYGNFHVIRETTMPAVLLEVGYLSNAKEEATLFDEDFQNRVAQGIADGITEYLDVK-----


General information:
TITO was launched using:
RESULT:

Template: 1JWQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70742 for 1563 contacts (-45.3/contact) +
2D Compatibility (PS) -19146 + (NN) -10036 + (LL) 3464
1D Compatibility (HY) -13200 + (ID) 2950
Total energy: -112610.0 ( -72.05 by residue)
QMean score : 0.496

(partial model without unconserved sides chains):
PDB file : Tito_1JWQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1JWQ-query.scw
PDB file : Tito_Scwrl_1JWQ.pdb: