Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTKTLFIFSAILTLSIFAPNETFAQTAGNLIEPKIINAETAQFSTKKLRKVDQMIERDIAAG-FPGAVLVVVKDGRIIKKAAYGYSKKYEGSELLRRPAKMKTRTMFDLASNTKMYATNFALQRLVSQGKLDVYEKVSAYLPGFKDQPGDLIKGKDKIRVIDVLQHQSGLPSSFYFYTPEKAGKYY--------SQERDKTIEYLTKIPLDYQTGTKHVYSDIGYMLLGCIVEKLTGKPLDVYTEQELYKPLRLKHTLYNPLQKGFKPKQFAATERMGNTRDGVIQFPNIRTNTLQGEVHDEKAFYSMDGVSGHAGLFSNADDMAILLQVMLNKGSYRNISLFDQKTADLFTAPSATDPT---FALGWRRNGSKSMEWMFGPHASENAYGHTGWTGTVTIIDPAYNLGIALLTNKKHTPVIDPEENPNVFEGDQFPTGSYGSVITAIYEAME- |
1CI9 Chain:A ((15-391)) | --------------------------------------------AASLAARLDAVFDQALRERRLVGAVAIVARHGEILYRRAQGLADREAG-------RPMREDTLFRLASVTKPI-VALAVLRLVARGELALDAPVTRWLPEFRPRLAD--GSEPLVTIHHLLTHTSGLGYWLLEGAGSVYDRLGISDGIDLRDFDLDENLRRLASAPLSFAPGSGWQYS-LALDVLGAVVERATGQPLAAAVDALVAQPLGMRDCGFVSAEPERFAVPYHDGQPEPVRMRDGIEVPLPEGHGAAVRFAPSRVFEPGAYPSGGAGMYGSADDVLRALEAIRANPGFLPETLADAARRDQAGVGAETRGPGWGFGYLSAVLDDPAAA---GTPQHAGTLQWGGVYGHSWFVDRALGLSVLLLTN-------------------TAYEGMSGPLTIALRDAVYA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CI9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108502 for 3208 contacts (-33.8/contact) +
2D Compatibility (PS) -38577 + (NN) -17151 + (LL) 5752
1D Compatibility (HY) -12400 + (ID) 4050
Total energy: -174928.0 ( -54.53 by residue)
QMean score : 0.365
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