Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNVNQNKKVLFLTDIENGLEPILQEATNTSAENMLTIQSYGASISHPYGEIMRSVIFAIYQEDVEEIFVVGTKDKKTSAGNGLTQL--------ETMKDKIQTLDYLFQNCKPEFLGGTVDEWL------N-ENSSDTIEKSVDMIRHHPLVPSYVKVRGLFVNHKGGKPSIAEVPDVKTGQAMPDHCLS
3TEO Chain:A ((24-189))
--IPNNRRLWVLTCMDERVHIE--QSLGIQPDDAHIYRNAGGIVT---DDAIRSASLTTNFFGTKEIIVVTHTDCGMLRFTGEEVAKYFISKGIKPTEVQLDPLLPAFRISSEE----DFIKWFKFYEDLGVKSPDEMALKGVEILRNHPLIPKDVRITGYVYEVETHRLRKPNQII-------------
General information:
TITO was launched using:
RESULT:
Template:
3TEO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51740 for 1087 contacts (-47.6/contact) +
2D Compatibility (PS) -16006 + (NN) -5246 + (LL) 1024
1D Compatibility (HY) -4400 + (ID) 1250
Total energy: -77618.0 ( -71.41 by residue)
QMean score : 0.441
(partial model without unconserved sides chains):
PDB file :
Tito_3TEO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TEO-query.scw
PDB file :
Tito_Scwrl_3TEO.pdb
: