Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVKKWLIQFAVMLSVLSTFTYSASAVGVTAITGNNSFDTAMPIGYWKYKNIDTTILEAGQDEAYFTFTANKGEKVYMRSTYQSAYTGMKIEIYDKNRIPVSQGTEVINPNTFSSFIYANADAQNTTDTFYVKVSRGTYTGNMYFTLSIEDRIKSGSGTFQFSGVAENKGN--------TSLSPSGSDSSVIKVDLTNQSGIPRDAI-----VTRVQTTATQTPSQGNTRHLIMTSEN-NEWSRALVNSSTSGSYDISLSDQLSVAKVWSFKYNTLATARSTMSNVKAKIDYEYDVTKQF |
| 2F1C Chain:X ((4-283)) | --NDWHFNIGAMYEIENV-GLAEPSVYFNAANGP----WRIALAYYQEGPVDYS----------------------KRGTWFD-----RPELEVHYQFLENDDFSFGLTGGFRNYGYHYVDEPGKD---TANMQRWKIAPDWDVKLTDDLRFNGWLSMYKFANDLNTTGYADTRVETETGLQYTFNETVALRVNYYLERGFNMDDSRNNGEFSTQEIRAYLPLTLGNHSVTPYTRIGLDRWSNDF--NRVGLFYGYDFQNGLSVSLEYAFEWQD-----DKFHYAGVGVNYSFHHH--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2F1C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 30292 for 1518 contacts (20.0/contact) +
2D Compatibility (PS) -25446 + (NN) -9691 + (LL) 3572
1D Compatibility (HY) -10400 + (ID) 1750
Total energy: -13423.0 ( -8.84 by residue)
QMean score : 0.123
|
|
|