Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-------------------MDKLTKEELIFL-------VKELMNPT-LDDEKVSEYLDLLEKN--VPYPAPSDLIFWSNEDYTAEQVVKIALNYKDE-
1SMT Chain:A ((24-121))ELQAIAPEVAQSLAEFFAVLADPNRLRLLSLLARSELCVGDLAQAIGVSESAVSHQLRSLRNLRLVSYRKQGRHVYYQLQDHHIVALYQNALDHLQEC


General information:
TITO was launched using:
RESULT:

Template: 1SMT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 157 -27591 -175.74 -405.75
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -175.74
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.495

(partial model without unconserved sides chains):
PDB file : Tito_1SMT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1SMT-query.scw
PDB file : Tito_Scwrl_1SMT.pdb: