Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKICYVLLSLVCVFLFSGCSAGEEASGKKEDVTLRIAWWGGQPRHDYTTKVIELYEKKNPHVHIEAEFANWDDYWKKLAPMSAAGQLPDVIQM-DTAYLAQYGKKNQLEDLTPYTKDGTIDVSSIDENMLSGGKIDNKLYGFTLGVNVLSVIANEDLLKKAGVSINQENWTWEDYEKLAYDLQEKAGVYGSNGMHPPDIFFPYYLRTKGER-FYKED--G----TGLAYQDDQLFVDYFERQLRLVKAK-TSPTPDESAQIKGMEDDFIVKGKSAITWNYSNQYLGFARLTDSPLSLYLPPEQMQEK--ALTLKPSMLFSIPKSSEHKKEAAKFINFFVNNEEANQLIKGERGVPVSDKVADAIKPKLNEEETNIVE-YVETASKNISKADPPEPVGSAEVIKLLKDTSDQILYQKV-SPEKAAKTFRKKANEILERNN
2GH9 Chain:A ((2-379))---------------------------------KITVWTHFGGPELEWLKEQARTFERT-SGTKVEVVEVPFAEIKQKFILGAPQGQAADLVVTVPHDWVGEMAQAGVLEPVGKYVTQ--AYLADLQGVAVEAFTFGGRLMGLPAFAESVALIYNKKYVKE----PP---RTWEEFLALAQKLTTG-ATFGFLYNIGDPYFNFGFFKAFGAENVFAKDAKGNLDPTKLLIGGE-VGEKALQFIKDLRFKYNLVPEG-V--DY-GVADGAFKDGALAMILNGPWALGDYKKA-KVDFGIAPFPVPPGAKNPWGPFLGVQGVVVNAYSKNKTQAVNFAKTLVTGRNLVAFNQAGGRIPVSKSAVKQLEK------DPVVAGFSKVF-PL-G-APMPNIPEMGKVWGPWGNAISLAIQRPDSNVKKIVEDMVAEIKKAIG---


General information:
TITO was launched using:
RESULT:

Template: 2GH9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2043 -195058 -95.48 -534.40
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -95.48
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.447

(partial model without unconserved sides chains):
PDB file : Tito_2GH9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GH9-query.scw
PDB file : Tito_Scwrl_2GH9.pdb: