Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMETFKSILHEAQRIVVLTGAGMSTESGIPDFRSAGGIWTEDASRMEAMSLDYFLSYPRLFWPKFKELFQMKMSGSFEPNEGHLLLAELE----KQGKQVDIFTQNIDGLHKKAGSRHVYELHGSIQTAACPACGA---RYDLP------------------HLLEREVPECTAAGNNGDICGTVLKTDVVLFGDAV--MHFDTLYEKLDQADLLLVIGTSLEVAPAR-FVPEDASLIPGMKKVIINLEPTYCDSLFDMVIHQKIGEFARSLGMKK
4HDA Chain:B ((13-258))MADFRKFFAKAKHIVIISGAGVSAESGVPTFRGAGGYWRKWQAQDLATPLA-FAHNPSRVWEFYH--YRREVMGSKEPNAGHRAIAECETRLGKQGRRVVVITQNIDELHRKAGTKNLLEIHGSLFKTRCTSCGVVAENYKSPICPALSGKGAPEPGTQDASIPVEKLPRCEEAG-----CGGLLRPHVVWFGENLDPAILEEVDRELAHCDLCLVVGTSSVVYPAAMFAPQVAAR--GVPVAEFNTETTPATNRF-------------------


General information:
TITO was launched using:
RESULT:

Template: 4HDA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1096 -98325 -89.71 -451.03
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain B : 0.75

3D Compatibility (PKB) : -89.71
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.477

(partial model without unconserved sides chains):
PDB file : Tito_4HDA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4HDA-query.scw
PDB file : Tito_Scwrl_4HDA.pdb: