Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKVFLIGANGQIGQRLVSLFQDNPDHSIRAMVRKEEQKASLEAAGAEAVLANLEGSPEEIAAAAKGCDAIIFTAGSGGSTGYDKTLLVDLDGAAKAIEAAAIAGIKRFIMVSALQAHNREN---------W----NEALKPYYVAKHYADKILEA---SGLTYTIIRPGGLRNEPGTG----TVS-AA--KD------LERGFISRDDVAKTVIASLDEKNTENRAFDLTEGDTPIAEALKKL
2X4G Chain:A ((13-269))VKYAVLGATGLLGHHAARAIRAAG-HDLVLIHRPSSQIQRLAYLEPECRVAEML-DHAGLERALRGLDGVIFS----------EEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQARNGLPVVIGIPGMVLGELDIGPTTGRVITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMALERG-RIGERYLLTGHNLEMADLTRR-


General information:
TITO was launched using:
RESULT:

Template: 2X4G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1012 -134313 -132.72 -671.57
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -132.72
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.428

(partial model without unconserved sides chains):
PDB file : Tito_2X4G.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2X4G-query.scw
PDB file : Tito_Scwrl_2X4G.pdb: