Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKIKDLMTA--DLQYCTVLDNVYEAAVKMKDANVGAIPVVDEDGETLVGIVTDRDLVLRGIAIKKPNSQKITDAMTEKPVSVEEDASVDEVLHLMASHQLRRIPVTKNKKLTGIVTLGDLSLSEQTNERAGSALSDISEGDNREEGFFH
4O9K Chain:A ((6-129))-TFVRDIMHTGDDTPVIGLEASVRDALLEMTAKKLGMTAIVDG-AGTIQGVFTDGDLRRLLEKAQDIHATPITAVMTRSCVTVEGSLLAAEAVRIMEQKRINALPVVENGRLIGAINMHDLLRAGV------------------------


General information:
TITO was launched using:
RESULT:

Template: 4O9K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 577 -76032 -131.77 -623.21
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -131.77
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.506

(partial model without unconserved sides chains):
PDB file : Tito_4O9K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4O9K-query.scw
PDB file : Tito_Scwrl_4O9K.pdb: