Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence------MTLWVGILVGVVALLIGVALGFFI---------ARKYMMSYLKKN--PPINEQMLRMMMMQMGMK----PSQKKINQMMKAMNNQTK------
4WYH Chain:A ((31-129))DYSWIEKVLEMGLQDSRKRFILYVASRYLVNVKGVNEDEALQTLKEFYYKLQSGKVYESWLKSVINGVKKKGLLPWSLKRIEERDKEMYNEIIRVLKNS


General information:
TITO was launched using:
RESULT:

Template: 4WYH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 234 -5540 -23.67 -76.94
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -23.67
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.310

(partial model without unconserved sides chains):
PDB file : Tito_4WYH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4WYH-query.scw
PDB file : Tito_Scwrl_4WYH.pdb: