Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNEIAEVLPESMKNALSEIPEQQWLEIEEVRIRINRPVELIRRGQPVYLSYAGTAEDAHLILSRLSNYSMYTLEEELKKGYVTIRGGHRVGLAGRVITENGGVKGLRDIASFNIRIARQKLGIAEPLLPYLYQN--SWLNTLIIGPPQTGKTTLLRDLARLSSTGKKNM--LPV------------KTGIVDERSEIAGCL--RGI----P-----QHQF---------GQ---------------RIDVLDACPKAEGLMMMIRS--MSPEVMIVDEIGRMEDTDA---LLEA---LHAGVSVIVSAHGWSISDLMKRPSLKRLWEERAFDRYLELSRAKG--PGTVSQIYDKDGNVLSRTTGVKTC
4Q9H Chain:A ((1047-1261))-----------------------------------------------------------------------------------------------------------------------------PVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPMAGSVFLDGKEIKQLNVQWLRAQLGIVSQEPILFDCSIAENIAYGDNSRVVSYEEIVRAAKEANIHQFIDSLPDKYNTRVGDKGTQLSGGQKQRI--AIARALVRQPHILLLDEATSALDTESEKVVQEALDKAREGRTCIVIAHRLSTI--------------QNADLIVVIQNGKVKEHGTHQQLLAQKG------------


General information:
TITO was launched using:
RESULT:

Template: 4Q9H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 584 4102 7.02 26.63
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : 7.02
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.318

(partial model without unconserved sides chains):
PDB file : Tito_4Q9H.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4Q9H-query.scw
PDB file : Tito_Scwrl_4Q9H.pdb: