Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSIATEAVMKQEVYQVNGMNLWYGQHHALKNINLSIYENEVTAIIGPSGCGKSTFIKTLNLMIQMTPNVKLAGELNYNGSNI-----------LKDKVDIVDLRKNIGMVFQKGNPFPQ-SIFDNVAYGP-RVHGTKNKKKLQEIVEKSLKDVALWDEVKDRLHTSALSLSGGQQQRLCIARALATNPDILLMDEPTSALDPISTRKIEELILELKDK-YTIVIVTHNMQQAARVSDQTAFFYMGELVECDNTNKMFSNPKDQRTLDYISGKFG
1B0U Chain:A ((5-257))-----------NKLHVIDLHKRYGGHEVLKGVSLQARAGDVISIIGSSGSGKSTFLRCINFLEKPS-----EGAIIVNGQNINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGL-SKHDARERALKYLAKVGIDERAQGKY---PVHLSGGQQQRVSIARALAMEPDVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIEEEGDPEQVFGNPQSPRLQQFLKGSL-


General information:
TITO was launched using:
RESULT:

Template: 1B0U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1245 -2917 -2.34 -12.21
target 2D structure prediction score : 0.76
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -2.34
2D Compatibility (Sec. Struct. Predict.) : 0.76
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.502

(partial model without unconserved sides chains):
PDB file : Tito_1B0U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1B0U-query.scw
PDB file : Tito_Scwrl_1B0U.pdb: