Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGKKMTIASLILMTAGLTACGANDNAMNDTRNNGNTRPIGYYTNENDADRQGDGIDHDGPVSELMEDQNDGNRNTTNVNNRDRVTADDRVPLATDGTYNNTNNRNMNRNAANNGYDNQENRRLAAKIANRVKQVKNVNDTQVMVSDDRVVIAVKSHREFTKSDRDNVVKAARNYANGRDVQVSTDKGLFRKLHKMNNR
1YG0 Chain:A ((14-47))-------------------------------------------------------------------------------------------------------------------------HCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDA-------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1YG0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 63 -14549 -230.93 -427.90
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -230.93
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.522

(partial model without unconserved sides chains):
PDB file : Tito_1YG0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1YG0-query.scw
PDB file : Tito_Scwrl_1YG0.pdb: