Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSKKPAALIILDGFGLRNETVGNAVALAKKPNFDRYWNQYPHQTLTASGEAVGLPEGQMGNSEVGHLNIGAGRIVYQSLTRVNVAIREGEFERNQTFLDAISNAKENNKALHLFGLLSDGGVHSHINHLFALLKLAKKEGLTKVYIHGFLDGRDVGPQTAKTYINQLNDQIKEIGVGEIASISGRYYSMDRDKRWDRVEKAYRAMAYGEGPSYRSALDVVDDSYANGIYDEFVIPSVITKENGEPVAKIQDGDSVIFYNFRPDRAIQISNTFTNKDFRDFDRGENYPKNLYFVCLTHFSETVDGYVAFKPINLDNTVGEVLSQHGLKQLRIAETEKYPHVTFFMSGGREAEFPGEERILINSPKVATYDLKPEMSAYEVKDALVKEIEADKHDAIILNFANPD-MVGHSGMVEPTIKAIEAVDECLGEVVDAILAKGGHAIITADHGNADILITESGEPHTAHTTNPVPVIVTKEGIT-----LREGGILGDLAPTLLDLLGVEKPKEMTGTSLIQK
3OT9 Chain:A ((226-395))-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GRTVMNELKDSDYDVIAI---GKI-S-DIYDGEGVTESL-------------------RTKSNMDGMDKLVDTLNMDFTGLSFLNLVDFDALFGHRRDPQGYGEALQEYDARLPEVFAKLKE-DDLLLITADHGNDPIHP---G---TDHTREYVPLLAYSPSMKEGGQELPLRQTFADIGATVAENFGVKMPE--YGTSFLN-


General information:
TITO was launched using:
RESULT:

Template: 3OT9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 652 -22373 -34.31 -136.42
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -34.31
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.322

(partial model without unconserved sides chains):
PDB file : Tito_3OT9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3OT9-query.scw
PDB file : Tito_Scwrl_3OT9.pdb: