Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------MSAEQPTIIYTLTDEAPLLATYAFLPIVRAFAEPAGIKIEASDISVAARILAE-FPDYLTEEQRVPDNLAELGRLTQLPDTNIIKLPNI----SASVPQLVAAIKELQ---DKGYAV---------------PDYPADPKTDQEK--------AIKERYARCLGSAVN-------PVLRQGNSDRRAPKAVKEYA-------RKHPHSMGEW-SMASRTHVAHMRHGDFYAGEKSMTLD-RARNVRMELLAKSGKTI----VLKPEVPLDDGDVIDSMFMSKKALCDFYEEQMQ-DAFETGVMFSLHVKATMMKVSHPIVFG---------------HAVRIF--YKDAFAKHQELFDDLGVNVNNGLSDLYSKIESLPASQRDEIIEDLHRCHEHRP------ELAMVDSARGISNFHSPSDVIVDASMPAMIRAG------GKMYGADGKL----------KDTKAVNPESTFSRIYQEIINFCKTN------GQFDPTTMGTVPNVGLMAQQAEEYGSHDKTFEIPEDGVANIVDVATGEVLLTENVEAGDIWRMCIVKDAPIRDWVKLAVTRARISGMPVLFWLDPYRPHENELIKKVKTYLKDHD--TEGLDIQIMSQVRSMRYTCERLVRGLDTIAATGNILRDYLTDLFPILELGTSAKMLSVVP--LMAGGGMYETGAGGSAPKHVKQLVEENHLRWDSLGEFLALGAGFED---IGIKTGNERAKLLGKTLDAAIGKLLDNDKSPSRKTGELDN---------RGSQFYLAMYWAQELAAQTDDQQLAEHFASLADVLTKNEDVIVRELTEVQGEPVDIGGYYAPDSDMTTAVMRPSKTFNAALEAVQG |
| 4ZUZ Chain:A ((8-864)) | DVIKFKEPERCDYLYVDENNKVHILLPIVGGDEIGLDNTCQTAVELITFFYGSAHSGVTKYSAEHQLSEYKRQLEEDIKAINSQKKISPHAYDDLLKEKIERLQQIEKYIELIQVLKKQYDEQNDIRQLRTGGIPQLPSGVKEIIKSSENAFAVRLSPYDNDKFTRFDDPLFNVKRNISKYDTPSRQAPIPIYEGLGYRLRSTLFPEDKTPTPINKKSLRDKVKSTVLSHYKDEDRIDGEKKDEKLNELITNLQNELVKELVKSDPQYSKLSLSKDPRGKEINYDYLVNSLMLVDNDSEIGDWIDTILDATVDSTVWAVQASSPFYQGAKEISSDRDADKISIRVQYLLAEANIYCKTNKLSDANFGEFFDKEPHATEIAKRVKEGFTQGADIEPIIYDYINSNHAELGLK-SPLTGKQQQEITDKFTKHYNTIKESPHFDEFFVADPDKK-GNIFSHQGRISCHFLDFFTRQTKGKHPLGDLASHQEALQEGTSNRLHHKNEVVAQGYEKLDQFKKEVVKLLAENKPKELLDYLVATSPTGVPNYSMLSKETQNYIAYNRNWPAIQKELEKATSIP--------ESQKQDLSRLLSRDNLQHDNLS--AITWSKYSSKPLLDVELNKIAEGLELTAKIYNEKRGREWWFAG------SRNEARKTQCEELQRVSKEINTLLQ--SESLTKSQVLEKVLNSIETLDKIDRDISAESNWFQS-----------TLQKEVRLFRDQLKDICQLDKYYFKSTKLDEIISLEMEEQFQKIQDPAVQQIVRDLPSHCHNDEAIEFFKTLNPEEAAKVASYLSLEY-REINKSTDKKTLLE-----QDIPRLFKEVNTQLLSKLKEEK-AIDEQVHEKLSQLADKIAPEHFTRNNIIKWST |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ZUZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -26968 for 4962 contacts (-5.4/contact) +
2D Compatibility (PS) -73293 + (NN) -1538 + (LL) 3320
1D Compatibility (HY) -16400 + (ID) 5700
Total energy: -120579.0 ( -24.30 by residue)
QMean score : 0.231
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