Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLFRQLEYFVAVAQERHFARAAEKCYVSQPALSSAIAKLERELNVTLINRGHSFEGLTREGERLVVWAKRILAEHAAFKAEVDAVRSGITGTLRLGTVPTASTT-ASLVLSAFCSAHPLAKVQVCSRLAATELYRRLREFELDAVIVHPETQDSDDVDLVPLYEEQYVLLSPADMLPPGTSTLVWRDAAQLPLALLTADMRDRQVIDAAFADHAV-SAIPQVETDSVASLFAQVATGNWASIVPHTWLWAMPMSGPTGGEIRAVELVDPVLKAQIALATNALGPGSPVARALITCAQALALNEFFDTQLRGITRRR |
3SZP Chain:A ((1-290)) | MKLDDLNLFRLVVENGSYTSTSKKTMIPVATITRRIQALEDSLNLRLLNRHARKLTLTEAGERFYKDCSPLLERLASMTEEITDECRGASGRIRISAPSNLTKRMMMPMFNAFMEKYPDIHIELMM-SNQ---ADDLDPTEWDVIFRVGPQ-RDSSLIARKIGEVKDILVASPQYLSSHPQPTHAEELHQHQLLKGYPLLK-WQL-TNSQGETVVNSDRGRFQASALNVVRSACSEGLGITLMPDVMLREF----LEDGSLVQVLSDWSSNPRDIYMLYNHKDHQPEKVRLFIDFVIGYHL--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SZP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -150845 for 2096 contacts (-72.0/contact) +
2D Compatibility (PS) -30872 + (NN) -8107 + (LL) 1592
1D Compatibility (HY) -11600 + (ID) 2400
Total energy: -202232.0 ( -96.48 by residue)
QMean score : 0.396
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