Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTPQARPARRADVRELSRTMARAFYDDPVMSWLLSNDNARTARLTRLFATIVRHQHLAGGGVEVARGAAGIGGAALWDPPDRWRESRRQQLAMTPGFLRVFGFRTAKARAALDVMMRVHPEEPH-WYLAAIGSDPTVRGQGFGQVLMRSRLDRCDAEHC-PAYLESTKPENVPYYQRFGFRVTREIALPDAGPPLWAMWREPR------------
3QB8 Chain:A ((1-197))
-MYTLIKLTSEYTSRAISFTSRNFVASEPTSIAL---KLTTCDFTTSFQNIMKQCVDYGHSFAFVDADDNIKAQILNIPYDAYENMHYGN--------------IRETDPMFDLFGNLDSYTPDDKCLYVFAIGSEVTGKGLATKLLKKTIEESSSHGFKYIYGDCTNIISQNMFEKHGFETVGSVKYKGYQYGITKPFDSINCTEYIKRMVKTI
General information:
TITO was launched using:
RESULT:
Template:
3QB8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51998 for 1434 contacts (-36.3/contact) +
2D Compatibility (PS) -19250 + (NN) -11261 + (LL) 1084
1D Compatibility (HY) -6000 + (ID) 1200
Total energy: -88625.0 ( -61.80 by residue)
QMean score : 0.383
(partial model without unconserved sides chains):
PDB file :
Tito_3QB8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QB8-query.scw
PDB file :
Tito_Scwrl_3QB8.pdb
: