Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDQRWLIDKSALVRLT-DSPDMEIWSNRIERG---LVHITGVTRLEVGFSAECGEIARREFREPPLSA-MPVEYLTPRIEDRALEVQTLLADRGHHRGPSIPDLLIAATAELSGLTVLHVDKDFDAIAALTGQKTERLTHRPPSA
4XGQ Chain:A ((1-132))
----MMVIDTSALVAMLSDEPDAERFEAAVEADHIRLMSTASYLETALVIEARFGEPGGRELDLWLHRAAVDLVAVHADQADAARAAYRTYGKGRHRAGLNYGDCFSYGLAKISGQPLLFKGEDF--------QHTDIATVALP--
General information:
TITO was launched using:
RESULT:
Template:
4XGQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36428 for 981 contacts (-37.1/contact) +
2D Compatibility (PS) -14055 + (NN) -5527 + (LL) 1036
1D Compatibility (HY) -4400 + (ID) 1650
Total energy: -61024.0 ( -62.21 by residue)
QMean score : 0.568
(partial model without unconserved sides chains):
PDB file :
Tito_4XGQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4XGQ-query.scw
PDB file :
Tito_Scwrl_4XGQ.pdb
: