Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNRIVQFGVSAVAAAAIGIGAGSGIAAAFDGEDEVTGPDADRARAAAVQ--AVPGGTAGEVETETGEGAAAYGVLVTRPDGTRVEVHLDRDFRVLDTEPADGDGG
3U1W Chain:A ((197-253))
-------------------------------------QEVPQIVMQGFESSAYASDKVQSIYTLLNANGTFYLFKVSH-NGQDKTITFDVFGNIV----------
General information:
TITO was launched using:
RESULT:
Template:
3U1W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15732 for 324 contacts (-48.6/contact) +
2D Compatibility (PS) -6285 + (NN) -6182 + (LL) 1616
1D Compatibility (HY) -2800 + (ID) 300
Total energy: -29683.0 ( -91.61 by residue)
QMean score : 0.508
(partial model without unconserved sides chains):
PDB file :
Tito_3U1W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3U1W-query.scw
PDB file :
Tito_Scwrl_3U1W.pdb
: