Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRRRAIQPSPALRIGPIELASPVVLAPMAGVTNVAFRALCRQLEQSKVGTVSGLYVCEMVTARALIERHPVTMHMTTFSADESPRSLQLYTVDPDTTYAAARMIAGEGLADHIDMNFGCPVPKVTKRGGGAALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAEGAAAVALHARTAAQRYSGTA-DWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDGVVIGRGCLGRPWLFAELSAAFTGSPAPTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDIRKHIAWYLHGFPAGSALRRALAMVKTFDELDCLLDRLDGTVPFPDSATGARGRQGSPARVALPDGWLTDPDDCRVPEGADAMGSGG |
| 4BFA Chain:A ((22-338)) | -------------------ASMRVLLAPMEGVLDSLVRELLTEVNDYDLCITEFVRVVDQLLPVKVFHRICPELQNASRTPSGTLVRVQLLGQFPQWLAENAARAVELG-SWGVDLNCGCPSKTVNGSGGGATLLKDPELIYQ-GAKAMREAVPAHLPVSVKVRLGWDSGEKKFEIADAVQQA-GATELVVHGRTKEQGYRAEHIDWQAIGDIRQRL-NIPVIANGEIWDWQSAQQCMAISGCDAVMIGRGALNIP----NLSRVVKYNEPRMP--WPEVVALLQKYTRLEKQGDTGLYHVARIKQWLSYLRKEYDEATELFQHVRVLNNSPDIARAIQAIDIEKL-------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BFA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166549 for 2778 contacts (-60.0/contact) +
2D Compatibility (PS) -34405 + (NN) -15204 + (LL) 2628
1D Compatibility (HY) -20000 + (ID) 4000
Total energy: -237530.0 ( -85.50 by residue)
QMean score : 0.494
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