Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVAVLSGAGISAESGVPTFRDDKNGLWARFDPYELSSTQGWLRNPERVWGWYLWRHYLVANVEPNDGHRAIAAW-----QDHAEVSVITQNVDDLHERAGSGAVHHLHGSLFEFRCARCG-------VPYTDAL-------PEMPEPAIEVEP-PVCD---CGGLIRPDIVWFGEPLPEEPWRSAVEATGSADVMVVVGTSAIVYPAAGLPDLALARGTAVIEVNPEPTPLSGSATISIRESASQALPGLLERLPALLK
4UTZ Chain:A ((26-275))
--IAIITGAGVSAESGVPTFRG-PGGFWRKWQAQDLATPEAFSRDPSLVWEFYHYRREVMRSKMPNPAHLAIAECEARLGQQGRSVVIITQNIDELHHRAGSKHVYEIHGSLFKTRCMSCGEVKANHKSPICPALDGKGAPDPNTKEARIPVELLPRCERKSCNGLLRPHVVWFGETLDSDILTAVERELEKCDLCLVVGTSSIVYPAAMFAPQVASRGVPVAEFNMECTPATQ--KYHFEGPCGSTLPPALE-------
General information:
TITO was launched using:
RESULT:
Template:
4UTZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109749 for 1744 contacts (-62.9/contact) +
2D Compatibility (PS) -24382 + (NN) -12021 + (LL) 1044
1D Compatibility (HY) -18000 + (ID) 4850
Total energy: -167958.0 ( -96.31 by residue)
QMean score : 0.525
(partial model without unconserved sides chains):
PDB file :
Tito_4UTZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4UTZ-query.scw
PDB file :
Tito_Scwrl_4UTZ.pdb
: