Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRSTPPASAGRSTPPALAGHSTPPALAGHSTLCGRPVAGDRALIMAIVNRTPDSFYDKGATFS-DAAARDAVHRAVADGADVIDVGGVKAGPG-ERVDVDTEITRLVPFIEWLRGAYPDQLISVDTWRAQVAKAACAAGADLINDTWGG-VDPAMPEVAAEFGAGLVCAHTGGALPRTRPFRVSYGTTTRGVVDAVISQVTAAAERAVAAGVAREKVLIDPAHDFGKNTFHGLLLLRHVADLVMTGWPVLMALSNKDVVGETLGVDLTERLEGTLAATALAAAAGARMFRVHEVAATRRVLEMVASIQGVRPPTRTVRGLA
3TYD Chain:A ((37-293))--------------------------------------NEKTLIMGILNVTPDSFS--GSYNEVDAAVRHA-KEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEVK-LPISIDTYKAEVAKQAIEAGAHIINDIWGAKAEPKIAEVAAHYDVPIILMHNRDNM------------NYRNLMADMIADLYDSIKIAKDAGVRDENIILDPGIGFAKTPEQNLEAMRNLEQLNVLGYPVLLGTSRKSFIGHVLDLPVEERLEGTGATVCLGIEKGCEFVRVHDVKEMSRMAKMMDAMIG------------


General information:
TITO was launched using:
RESULT:

Template: 3TYD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -147275 for 2126 contacts (-69.3/contact) +
2D Compatibility (PS) -28352 + (NN) -17993 + (LL) 1880
1D Compatibility (HY) -20800 + (ID) 4650
Total energy: -217190.0 ( -102.16 by residue)
QMean score : 0.494

(partial model without unconserved sides chains):
PDB file : Tito_3TYD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TYD-query.scw
PDB file : Tito_Scwrl_3TYD.pdb: