Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRSTPPASAGRSTPPALAGHSTPPALAGHSTLCGRPVAGDRALIMAIVNRTPDSFYDKGATFS-DAAARDAVHRAVADGADVIDVGGVKAGPG-ERVDVDTEITRLVPFIEWLRGAYPDQLISVDTWRAQVAKAACAAGADLINDTWGG-VDPAMPEVAAEFGAGLVCAHTGGALPRTRPFRVSYGTTTRGVVDAVISQVTAAAERAVAAGVAREKVLIDPAHDFGKNTFHGLLLLRHVADLVMTGWPVLMALSNKDVVGETLGVDLTERLEGTLAATALAAAAGARMFRVHEVAATRRVLEMVASIQGVRPPTRTVRGLA |
3TYD Chain:A ((37-293)) | --------------------------------------NEKTLIMGILNVTPDSFS--GSYNEVDAAVRHA-KEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEVK-LPISIDTYKAEVAKQAIEAGAHIINDIWGAKAEPKIAEVAAHYDVPIILMHNRDNM------------NYRNLMADMIADLYDSIKIAKDAGVRDENIILDPGIGFAKTPEQNLEAMRNLEQLNVLGYPVLLGTSRKSFIGHVLDLPVEERLEGTGATVCLGIEKGCEFVRVHDVKEMSRMAKMMDAMIG------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TYD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147275 for 2126 contacts (-69.3/contact) +
2D Compatibility (PS) -28352 + (NN) -17993 + (LL) 1880
1D Compatibility (HY) -20800 + (ID) 4650
Total energy: -217190.0 ( -102.16 by residue)
QMean score : 0.494
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