Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRHFLRDDDLSPAEQAEVLELAAELKKDPVS---RRPLQGPRGVAVIFDKNSTRTRFSFELGIAQLGGHAVVVDSGSTQLGRDETLQDTAKVLSRYVDAIVWRTFGQERLDAMASVATVPVINALSDEFHPCQVLADLQTIAE--RKGALRGLRLSYFGDGANNMAHSLLLGGVTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTADAHAAAAGADVLVTDTWTSMGQENDGLD-RVKPFRPFQLNSRLLA-LADSDAIVLHCLPAHRGD-----------------EITDAVMDGPASAVWDEAENRLHAQKALLVWLLERS |
| 4JQO Chain:B ((32-353)) | --RNFLKLLDFSTKEIQFLIDLSADLKKAKYAGTEQKKLLG-KNIALIFEKASTRTRCAFEVAAFDQGAQVTYIGPSGSQIGDKESMKDTARVLGRMYDGIQYRGFGQAIVEELGAFAGVPVWNGLTDEFHPTQILADFLTMLEHSQGKALADIQFAYLGDARNNVGNSLMVGAAKMGMDIRLVGPQAYWPDEELVAACQAIAKQTGGKITLTENVAEGVQGCDFLYTDVWVSMGESPEAWDERVALMKPYQVNMNVLKQTGNPNVKFMHCLPAFHNDETTIGKQVADKFGMKGLEVTEEVFESEHSIVFDEAENRMHTIKAVMV------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JQO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166177 for 2578 contacts (-64.5/contact) +
2D Compatibility (PS) -33478 + (NN) -24410 + (LL) 956
1D Compatibility (HY) -29200 + (ID) 5750
Total energy: -258059.0 ( -100.10 by residue)
QMean score : 0.570
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