Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRAKAAPVAGPEVAANRAGRQARIVAILSSAQVRSQNELAALLAAEGIEVTQATLSRDLEELGAVKLRGADGGTGIYVVPEDGSPVRGVSGGTDRMARLLGELLVSTDDSGNLAVLRTPPGAAHYLASAIDRAALPQVVGTIAGDDTILVVAREPTTGAQLAGMFENLR
2ZFZ Chain:C ((2-79))
--------------------------------------------------------------------------------------------GTDRMARLLGELLVSTDDSGNLAVLRTPPGAAHYLASAIDRAALPQVVGTIAGDDTILVVAREPTTGAQLAGMFENLR
General information:
TITO was launched using:
RESULT:
Template:
2ZFZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57147 for 580 contacts (-98.5/contact) +
2D Compatibility (PS) -8682 + (NN) -6145 + (LL) 6148
1D Compatibility (HY) -9600 + (ID) 3900
Total energy: -79326.0 ( -136.77 by residue)
QMean score : 0.809
(partial model without unconserved sides chains):
PDB file :
Tito_2ZFZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZFZ-query.scw
PDB file :
Tito_Scwrl_2ZFZ.pdb
: