Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAVNRRVPRVRDLAPLLQFNRPQFDTSKRRLGAALTIQDLRRIAKRRTPRAAFDYADGGAEDELSIARARQGFRDIEFHPTILRDVTTVCAGWNVLGQPTVLPFGIAPTGFTRL---MHTEGEIAGARAAAAAGIPFSLSTLATCAIEDLVIAVPQGRK--WFQLYMWRDRDRSMALVRRVAAAGFDTMLVTVDVPVAGARLRDVR----NGMSIPPALTLRTVLDAMGHPRWWFDLLTTEPLAFASLDRWPGTVGEYLNTVFDPSLTFDDLAWIKSQWPGKLVVKGIQTLDDARAVVDRGVDGIVLSNHGGRQLDRAPVPFHLLPHV-----ARELGKHTEILVDTGIMSGADIVAAIALGARCTLIGRAYLYGLMAGGEAGVNRAIEILQTGVIRTMRLLGVTCLEELSPRHVTQLRRLGPIGAPT
1LCO Chain:A ((119-475))------------------------------LDNIINLYDFEYLASQTLTKQAWAFYSSGANDEVTHRENHNAYHRIFFKPKILVDVRKVDISTDMLGSHVDVPFYVSATALCKLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSPEEIIEAAPSDKQIQWYQLYVNSDRKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKFS----------------------A-------------------------LSKFIDPSLTWKDIEELKKKTKLPIVIKGVQRTEDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFVDGGVRRGTDVLKALCLGAKGVGLGRPFLYANSCYGRNGVEKAIEILRDEIEMSMRLLGVTSIAELKP----------------


General information:
TITO was launched using:
RESULT:

Template: 1LCO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -230406 for 2791 contacts (-82.6/contact) +
2D Compatibility (PS) -34580 + (NN) -10384 + (LL) 5536
1D Compatibility (HY) -23600 + (ID) 5700
Total energy: -299134.0 ( -107.18 by residue)
QMean score : 0.509

(partial model without unconserved sides chains):
PDB file : Tito_1LCO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1LCO-query.scw
PDB file : Tito_Scwrl_1LCO.pdb: