Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKAGVAQQRSLLELAKLDAELTRIAHRATHLPQRAAYQQVQAEHNAANDRMAALRIAAEDLDGQVSRFESEIDAVRKRGDRDRSLLTSGATDAKQLADLQHELDSLQRRQASLEDALLEVLERREELQAQQTAESRALQALRADLAAAQQALDEALAEIDQARHQHSSQRDMLTATLDPELAGLYERQRAG-GGPGAGRLQGHRCGACRIEIGRGELAQISAAAEDEVVRCPECGAILLRLEGFEE |
3NA7 Chain:A ((1-237)) | -LGSNTHLKQLIEISHLDKEIDSLEPLIREKRKDLD--KALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQKKMSEIKSE-RELRSLNIEEDIAKERSNQANREIENLQNEIKRKSEKQEDLKKEMLELEKLALELESLVENEVKNIKETQQIIFKKKEDLVEKTEPKIYSFYERIRRWAKNTSIVTIKKQACGGCFIRLNDKIYTEVLTS--GDMITCPYCGRILYAEGA--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NA7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -24657 for 1512 contacts (-16.3/contact) +
2D Compatibility (PS) -27808 + (NN) -24040 + (LL) 1152
1D Compatibility (HY) -8800 + (ID) 1850
Total energy: -86003.0 ( -56.88 by residue)
QMean score : 0.666
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