Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTAMRGDIRAARERDPAAPTALEVIFCYPGVHAVWGHRLAHWLWQRGARLLARAAAEFTRILTGVDIHPGAVIGARVFIDHATGVVIGETAEVGDDVTIYHGVTLGGSGMVGGKRHPTVGDRVIIGAGAKVLGPIKIGEDSRIGANAVVVKPVPPSAVVVGVPGQVIGQSQPSPGGPFDWRLPDLVGASLDSLLTRVARLEALGGGPQAAGVIRPPEAGIWHGEDFSI
1SSQ Chain:D ((80-244))
-------DIQAVRHRDPAVELWSTPLLYLKGFHAIQSYRITHYLWNQNRKSLALYLQNQISVAFDVDIHPAAKIGHGIMFDHATGIVVGETSVIENDVSILQGVTLGGTGKESGDRHPKVREGVMIGAGAKILGNIEVGKYAKIGANSVVLNPVPEYATAAGVPARIVSQDK---------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1SSQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -127142 for 1357 contacts (-93.7/contact) +
2D Compatibility (PS) -18158 + (NN) -10373 + (LL) 2560
1D Compatibility (HY) -12800 + (ID) 3700
Total energy: -169613.0 ( -124.99 by residue)
QMean score : 0.597
(partial model without unconserved sides chains):
PDB file :
Tito_1SSQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SSQ-query.scw
PDB file :
Tito_Scwrl_1SSQ.pdb
: